Title Identification of astrocytoma blood serum protein profile /
Authors Vaitkiene, Paulina ; Urbanavičiūtė, Rūta ; Grigas, Povilas ; Steponaitis, Giedrius ; Tamašauskas, Arimantas ; Skiriutė, Daina
DOI 10.3390/cells9010016
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Is Part of Cells.. Basel : MDPI. 2020, vol. 9, no. 1, art. no. 16, p. 1-9.. ISSN 2073-4409. eISSN 2073-4409
Keywords [eng] Protein antibody array ; astrocytoma ; decision tree ; glioblastoma ; serum proteins ; survival
Abstract [eng] High-grade astrocytomas are some of the most common and aggressive brain cancers, whose signs and symptoms are initially non-specific. Up to the present date, there are no diagnostic tools to observe the early onset of the disease. Here, we analyzed the combination of blood serum proteins, which may play key roles in the tumorigenesis and the progression of glial tumors. Fifty-nine astrocytoma patients and 43 control serums were analyzed using Custom Human Protein Antibody Arrays, including ten targets: ANGPT1, AREG, IGF1, IP10, MMP2, NCAM1, OPN, PAI1, TGFβ1, and TIMP1. The decision tree analysis indicates that serums ANGPT1, TIMP1, IP10, and TGFβ1 are promising combinations of targets for glioma diagnostic applications. The accuracy of the decision tree algorithm was 73.5% (75/102), which correctly classified 79.7% (47/59) astrocytomas and 65.1% (28/43) healthy controls. The analysis revealed that the relative value of osteopontin (OPN) protein level alone predicted the 12-month survival of glioblastoma (GBM) patients with the specificity of 84%, while the inclusion of the IP10 protein increased model predictability to 92.3%. In conclusion, the serum protein profiles of ANGPT1, TIMP1, IP10, and TGFβ1 were associated with the presence of astrocytoma independent of its malignancy grade, while OPN and IP10 were associated with GBM patient survival.
Published Basel : MDPI
Type Journal article
Language English
Publication date 2020